Funnily enough I've been rewatching Voyager these last few days and though I don't think it does have anything quite that good, I have been surprised at just how many solid episodes there were. I haven't rewatched The Raven yet, but that could be one of the more emotionally powerful eps, since it concerns Seven's parents getting assimilated. Blink of an Eye certainly has an Inner Light flavour, but it doesn't focus on any main characters. Maybe Faces, where B'Elanna's split in to human and Klingon halves?
But the best episodes seem to either involve time travel, the ship exploding, or both. Here are the ones I've rewatched so far...
Timeless - This time Voyager is destroyed by a failed engine upgrade resulting in a crash landing. Brilliant idea and got a great atmosphere to it. Unfortunately, Garrett Wang steps over into melodrama a few times with his angst ridden Kim. It was his fault that Voyager crashed, so he has a couple of "I KILLED THEM ALL - I KILLED THEEEEMM ARGH!" type moments. But it has awesome effects, most of the characters dying and Captain Geordi Motherfucking LaForge.
Relativity - This time Voyager is destroyed by a timebomb. Interesting plot that revisits various periods during the series, as well as Voyager's construction in orbit of Mars, which is nice eye candy. Seven looks hotter in a figure-hiding uniform.
Year of Hell - This time Voyager is destroyed by typical womens driving.
Future's End - This time Voyager is destroyed by a time rift or something. Sarah Silverman doesn't mention her grandmother's cunt for a whole hour and a half.
Shattered - Pretty bad episode that tries to remind us of all of the series' high points, with attempts ranging from marginally successful, to fourth wall breaking lines such as "maybe this is the time we got attacked by an alien pitcher plant, or it could be the time aliens attacked us in our sleep". It doesn't exactly help that it's Chakotay giving us this tour of time. It's funny watching this after Relativity, where the Temporal Prime Directive meant everyone kept schtum about future events. In this episode nobody gives a shit. Correctly predicted that Naomi Wildman would grow up to be hot. Er, incorrectly predicted that she'd be a dirty blond.
Message in a Bottle - In this episode, Voyager doesn't travel through time, get overrun or blown up! And Andy Dick isn't annoying. Miracles do happen at Christmas!
Omega Directive - I don't know why I put myself through this. I already had a strong feeling it was bad, but I got curious. The bits about Seven's interest in "perfection" and some religious back and forth between Janeway is interesting, but there are a million reasons why this episode is terrible. I mean, the entire ship becomes inoperable when it detects the Omega Particle, which seems a bit like a car's breaks being rigged by the manufacturers to fail whenever it detects ice on the road.